Shopify is one of the most popular ecommerce platforms. However, they have some limitations in their accounting reporting.

One thing to note is that not all Shopify reports can be accessed by store owners with all plans. This means that you might not be able to access certain accounting reports if your business doesn’t have the resources to pay for a higher-tier plan.

What is The Best Shopify Accounting App?

Many Shopify accounting apps offiring quick and easy accounting solutions share several commonalities. They’re:

  • It is easy to integrate with other tools:- Shopify should seamlessly integrate with your software.
  • Cloud-based:- Cloud-based services offer easy access to up-to-date information across devices. They also reduce errors that can sometimes occur when manually syncing data.
  • Shopify should be able meet your current and future reporting requirements:- A Shopify accounting solution that is reliable will not only provide the reporting capabilities you require now but also scale with your business.
  • Accessible on all devices:- The options below include a web app and mobile apps for Android or iOS.
Hire Shopify Experts

1. QuickBooks Online Global

Sync your sales channel with QuickBooks Online (Global Only)

Save time and stay ahead of your bookkeeping when you integrate Shopify with QuickBooks Online International-only. Easily manage the connection between Shopify and QuickBooks Online. For merchants that sell outside of US. Find here top-rated Shopify accounting App.

Connect all of your Shopify storefronts to QuickBooks Online accounting to track income and expenses and maximize tax deductions. Automate entering invoices, customers, or products by connecting Shopify and QuickBooks Online. Synchronize your inventory and accounting data between Shopify and QuickBooks Online. Automatically calculate sales on your invoices.


  • Share added products from Shopify to QuickBooks Online.
  • Create a sales invoice or receipt in QuickBooks Online when an order is made in Shopify.
  • Update stock levels between QuickBooks Online and Shopify

=> Link:-

=> Pricing:- Free to install | $30/month

=> Reviews:- 4.9/5 by 1468 Users

2. German accounting Integration

Manage DATEV-ready vouchers, taxes, payments & customers

German accounting Integration is one of the leading Shopify Accounting App for your Shopify store.

Synchronisation of payment data (compatible with Paypal, Klarna, Klarna ‘Kauf Auf Rechnung’, Amazon, Sofortkauf, Apple Pay, Credit Card, Samsung Pay, Shopify Payments, Google Pay) Booking of OSS-relevant documents (tax reform 2021) More security and faster loading times through Session Token Precisely define delivery date / service date & delivery period / service period Reporting of sales per customer in lexoffice Transfer of company name from Shopify checkout to lexoffice Mark Invoices due when creating them. Save another click and precious time!

Small Business Owner? We got you covered. Create Invoices without taxes.


  • Import past Shopify orders
  • Create Lexoffice invoices for your Shopify orders automatically
  • Exclude sales tax if you are a “Kleinunternehmer”
  • Booking of OSS-relevant documents (tax reform 2021)
  • Send customers their invoices via email automatically
  • Sync POS orders with Lexoffice
  • Update invoices automatically for refunds or partial refunds
  • Individual invoice layouts – including layout designer

=> Link:-
=> Pricing:- 14-day free trial | $10/month
=> Reviews:- 4.9/5 by 143 Users

3. F+2: Order Printer Templates

Custom invoice, packing slip, receipt & return form templates

These professional invoices, packing slips, gift receipts & returns form templates are easily customized to suit your brand and design, without you having to touch a line of code! Don’t waste your time or money paying an expensive designer to design your branded documents, use Order Printer Templates instead.

It is one of the best German accounting Integration, You can just install and start configaring the tax, order details & more.


  • Easy design customization using logo, fonts and colors
  • Customisable store information, contact details, social media
  • Used by Shopify stores in the USA, Europe, UK, Australia, Canada and more
  • VAT & GST tax amounts and rates for invoices
  • Works with Shopify Markets, including multi-currency in invoices
  • Custom Google Fonts and theme color styling
  • Product images & Barcodes
  • Internationalisation of date and address formats to suit your country
  • Include the text of important terms and conditions in invoices
  • Order pricing, tax info, order notes, and product details
  • Works with Product Options and Product Customizer apps
  • Works with edited orders
  • Works with note and cart attributes
  • Support for Integrated Label style paper, so you get a document and address label in one

=> Link:-
=> Pricing:- Free to install
=> Reviews:- 4.9/5 by 1101 Users

4. QuickBooks Online Sync

Automate accounting, track payouts, & sync inventory.

Webgility’s Modern Commerce Workspace is designed to work with QuickBooks and brings together all your commerce apps, like Shopify, Amazon, WooCommerce, eBay, Etsy, and more. With Webgility, you can cut time and money spent on tedious accounting tasks and inventory updates – so you can focus on growing your business.

QuickBooks Online Sync is one of the best automate accounting app which is German accounting Integration.


  • Eliminate Manual Bookkeeping
  • Collaborate with Your Accountant
  • Close Your Books with Ease
  • Rely on Up-to-Date Financials
  • Enjoy Easier Sales Tax Filing
  • Get Actionable Insights

Pricing:- 15-day free trial | $129/month
Reviews:- 4.9/5 by 823 Users

5. A2X Quickbooks or Xero Sync

Automate Your Accounting. Trusted by 1000s. Xero Staff Pick

A2X automates accounting for Shopify stores worldwide using Xero, QuickBooks & Sage. Trusted by hundreds of leading e-commerce accounting firms as Shopify accounting app.

A2X for Shopify posts Shopify store sales automatically to Xero, QuickBooks, Sage & reconciles your payouts so that you know everything has been accounted for correctly. Never waste another minute manually reconciling your Shopify payouts and figuring out fees, refunds or adjustments. A2X automates that manual process, transforming what took hours into a few seconds.


  • Shopify Plus + Shopify POS
  • Tidy up your books with A2X
  • Monitor your Shopify Store, detect payouts, and post-sales
  • Works with other ecommerce platforms

=> Link:-
=> Pricing:- 30-day free trial | $19/month
=> Reviews:- 4.9/5 by 200 Users

6. Xero Bridge by Parex

Integrate your sales data to your Xero account with ease

Sync your Shopify data with your Xero online account automatically with our Xero Bridge app for Shopify as a leading Shopify accounting app.

Our app will sync all your Customers, Products, and Orders from Shopify to Xero. You can choose to do it automatically or initiate it yourself. Export all your Orders, Products & Customer data to Xero Automatically. You can choose your data to Xero automatically or prefer to do it manually at your convenience.

You may have prepaid orders, or might have orders for which payment will be received later. With your app, you do not have to worry about. The Order sync will happen as it is in your Shopify account. If a payment is received later on, it will be updated in Xero at that time. Also, cancellations & refunds are synced appropriately.

If you would like to sync your inventory quantities between Xero and Shopify, we have an inventory sync add-on feature, which will sync product quantities from Xero to Shopify.


  • Tax & Shipping lines
  • We have you covered. We will even sync the Tax lines & Shipping line items to your Xero Account.
  • Inventory Sync Add-on Feature
  • Few other optional add-on features which might cost an additional monthly or one-time charge

=> Link:-
=> Pricing:- 7-day free trial | $10/month
=> Reviews:- 5/5 by 176 Users

7. QuickBooks, Xero sync ‑ Synder

Auto-post Sales, Fees and Inventory to QuickBooks or Xero

Live sync of your Shopify store sales with all details like processor fees, taxes, and order information accounted for to Xero and QuickBooks. Synder simplifies the reconciliation process to a one-click action. No complicated wording or misleading set up process. Enablement takes 30 minutes from start to finish.

No need to manually enter historical sales into accounting. Select a needed date range and upload transactions into QuickBooks or Xero in seconds. No time limits – bookkeepers are obsessed with this function as it saves them dozens of hours with their clients.


  • Shopify+variety of other platforms under one hood
  • Import all Shopify historical data into accounting in minutes
  • Growth reports and Inventory adjustment
  • Multi-currency supported
  • Human support and easy set up

=> Link:-
=> Pricing:- 7-day free trial | $13.88/month
=> Reviews:- 4.8/5 by 172 Users

8. QuickBooks Enterprise Sync

Automate accounting, inventory and product listing

Webgility’s Modern Commerce Workspace is designed to work with QuickBooks Pro/Premier/Enterprise and brings together all your commerce apps, like Shopify, Amazon, WooCommerce, Etsy, and more. With Webgility, you can expand your ecommerce business, cut time and money spent on accounting, and get insights to increase profitability. Let us help you get back to business so you can grow faster and win.

Get a handle on managing product listings, inventory, and orders. Webgility optimizes workflows that enable you to expand your ecommerce business.

Forget about manual data entry and complex spreadsheets. Webgility automatically syncs your sales and financial data to cut investment in accounting.


  • Jurisdiction into your QuickBooks for easier filling
  • Easily audit and roll back changes
  • Close Your Books with Ease Your accounts neatly match your bank deposits

=> Link:-
=> Pricing:- 15-day free trial | $129/month
=> Reviews:- 4.8/5 by 179 Users

9. Xero or QuickBooks Sync

Bookkeeping that’s accurate and automatic. Trusted by 1,000’s

Trusted by thousands of e-commerce sellers and leading accountants to ensure their bookkeeping is accurate, efficient, and hassle-free.

Link My Books helps you to save time on your e-commerce bookkeeping, have 100% confidence in your figures and often stops you from overpaying VAT/GST or tax on your sales.

We fetch, automatically, all the data we need via our direct integration with Shopify, to generate a summary invoice for each payout. We break down all the sales, refunds and fees checking the tax jurisdiction for each transaction and automatically applying the correct tax rates that you choose during setup.


  • Generate a summary invoice for each payout
  • Correct tax rates that you choose during setup
  • Integrates with Shopify, Amazon, eBay and Etsy plus Xero and QuickBooks
  • Reconciling your bank statement now takes seconds rather than hours

=> Link:-
=> Pricing:- 14-day free trial | $17/month
=> Reviews:- 5/5 by 14 Users

10. QuickBooks Desktop

Integrate your data with QuickBooks Desktop account with ease

Sync your Shopify data with your QuickBooks Desktop automatically with our app. Our app will sync your Customers, Products, and Orders from Shopify to QuickBooks Desktop.

Export your Orders, Products & Customer data to your QuickBooks Desktop file automatically. You can choose to set your data sync to Auto mode or prefer to do it manually at your convenience. When our app syncs the orders, it will also sync the associated products to QuickBooks Desktop file exactly like the details in Shopify. Currently, we sync only the products associated with the orders that are synced.


  • Multiple Shopify Stores to 1 QuickBooks Desktop File
  • Tax & Shipping lines
  • Inventory Site Mapping
  • Inventory Sync
  • Bundle/Assembly Support
  • UOM Mapping

=> Link:-
=> Pricing:- 7-day free trial | $40/month
=> Reviews:- 4.7/5 by 24 Users

Hire Shopify Experts

CartCoders is also a Shopify expert, and thousands of Shopify store owners hire our Shopify experts to install for bookkeeping and Shopify accounting app and other customization. We have the expertise to produce tax-ready financials that Shopify users can rely on.

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